ncRNA ID | novel_jre_miR1045 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389472.1:215302-215399 [+] |
Reference genome | wgs.5d |
Source | SRR1168884 |
Length | 24 |
Mature sequence(if miRNA) | 75 - AAAAUCCUCCCAACUCAUCAUUAC - 98 |
Stem-loop(if miRNA) |
--            A  U  GUUUG    -      UCAC      AAUC   AAUGAUGAGUUG GA GA     UGAU CCAAAC    CCUUAA    C   |||||||||||| || ||     |||| ||||||    ||||||   UUACUACUCAAC CU CU     GCUA GGUUUG    GGAGUU    A CA            C  C  -AAAA    A      CUUU      GAGC |
Stem-loop sequence | AAUGAUGAGUUGAGAUGAGUUUGUGAUCCAAACUCACCCUUAAAAUCCACGAGUUGAGGUUUCGUUUGGAAUCGAAAAUCCUCCCAACUCAUCAUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018999005.1 |
|
2.5 | PREDICTED: Juglans regia DNA-directed RNA polymerase II subunit 1-like (LOC109016614), partial mRNA | NA | coding protein | psRNATarget |