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BaseInfo

ncRNA ID	novel_jre_miR1044
Species	Juglans regia
Class	miRNA
Genome position	NW_017388845.1:770080-770244 [+]
Reference genome	wgs.5d
Source	SRR1168884
Length	24
Mature sequence(if miRNA)	142 - AUUCCAUGACUGUAUGUAGCAUUA - 165
Stem-loop(if miRNA)	--   A   U          -      A                          -    AAUGAAUAU   A     -  G      AA   AUG UAC UGCAGUCGUG AGUGUG AAGUGUCGUGCAGUCGCUUUGAAAAA AGUG         GGG UCCAC AU AAAAGA  U   ||| ||| |||||||||| |||||| |||||||||||||||||||||||||| ||||         ||| ||||| || ||||||   UAC AUG AUGUCAGUAC UUACGC UUUGCGGCACGUCAGCGAAACUUUUU UCAC         CCC AGGUG UA UUUUUU  U AU   G   U          C      G                          C    ---------   -     A  A      AA
Stem-loop sequence	AUGAUACUUGCAGUCGUGAGUGUGAAAGUGUCGUGCAGUCGCUUUGAAAAAAGUGAAUGAAUAUGGGAUCCACAUGAAAAGAAAUUAAUUUUUUAAUAGUGGACCCCACUCUUUUUCAAAGCGACUGCACGGCGUUUGCGCAUUCCAUGACUGUAUGUAGCAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018964869.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1051   UAAUGCUACAUACAGUUAUGGAAU   1074 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1580   UAAUGCUACAUACAGUUAUGGAAU   1603 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1653   UAAUGCUACAUACAGUUAUGGAAU   1676 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   ||||||||||||||||=||||||| targets:1877   UAAUGCUACAUACAGUUAUGGAAU   1900 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018969255.1	ncRNA:24   AUUACGAUGUAUGUCAGUACCUUA   1   |||||=||||||||||||||||=| targets:1886   UAAUGUUACAUACAGUCAUGGAGU   1909 Target Full Sequence	2.5	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget