ncRNA ID | novel_jre_miR1041 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443578.1:1554051-1554156 [+] |
Reference genome | wgs.5d |
Source | SRR1168884 |
Length | 24 |
Mature sequence(if miRNA) | 83 - UUUGGAGAAUUGUAGGGAAAUGCU - 106 |
Stem-loop(if miRNA) |
--U           -             -     -  -      UC UA    AU    GUUUCCUUACA UUCUUCGGGUAUG UGGUC UG UAAGUU  U  GCCC  G    ||||||||||| ||||||||||||| ||||| || ||||||  |  ||||  A    UAAAGGGAUGU AAGAGGUUUAUAC AUCAG AC AUUCAG  A  UGGG  A UCG           U             G     U  U      -U GC    AU |
Stem-loop sequence | UGUUUCCUUACAUUCUUCGGGUAUGUGGUCUGUAAGUUUCUUAGCCCAUGAAUAGGGUCGAUGACUUAUCAUGACUAGCAUAUUUGGAGAAUUGUAGGGAAAUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018986651.1 |
|
1.5 | PREDICTED: Juglans regia phosphatidylinositol 4-phosphate 5-kinase 1-like (LOC109007108), mRNA | NA | coding protein | psRNATarget |