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BaseInfo

ncRNA ID novel_jre_miR1034
Species Juglans regia
Class miRNA
Genome position NW_017442448.1:132081-132240 [+]
Reference genome wgs.5d
Source SRR1168884
Length 24
Mature sequence(if miRNA) 137 - AAAGUGUGAGGCUUACGUGUAGCA - 160
Stem-loop(if miRNA) --A     A   A         CC                 -       A            C            GAAAAU
   UAUAC UAA CCUCACACU  UGCACACCACUUAAAAG UAUGUGA UUUAUUCUUUUA CCUCAUGUUUCA      A
   ||||| ||| |||||||||  ||||||||||||||||| ||||||| |||||||||||| ||||||||||||
   AUGUG AUU GGAGUGUGA  ACGUGUGGUGAAUUUUU AUACACU AAAUGAGAAAAU GGAGUAUAAAGU      U
ACG     C   C         -A                 U       A            A            AUAAAG
Stem-loop sequence AUAUACAUAAACCUCACACUCCUGCACACCACUUAAAAGUAUGUGAAUUUAUUCUUUUACCCUCAUGUUUCAGAAAAUAUGAAAUAUGAAAUAUGAGGAUAAAAGAGUAAAAUCACAUAUUUUUUAAGUGGUGUGCAAAGUGUGAGGCUUACGUGUAGCA