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BaseInfo

ncRNA ID novel_jre_miR1028
Species Juglans regia
Class miRNA
Genome position NW_017389990.1:322838-323011 [+]
Reference genome wgs.5d
Source SRR1168884
Length 24
Mature sequence(if miRNA) 151 - AUUGUUGCUAAGGUUGGGUUGAAG - 174
Stem-loop(if miRNA) --                    U                A                             AGG  CUUCACGUUGUGGC
  UCAACCCAACCUUAGCAACA UGUUGGUGUUGAUAAA UUGUGUGUGGAGCCACUAUCUACCAACAA   GA              U
  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||   ||
  AGUUGGGUUGGAAUCGUUGU ACAACCACAACUAUUU AACACAUACCUCGGUGAUAGAUGGUUGUU   UC              U
GA                    U                C                             --C  AAGGGAUGUUGAAG
Stem-loop sequence UCAACCCAACCUUAGCAACAUUGUUGGUGUUGAUAAAAUUGUGUGUGGAGCCACUAUCUACCAACAAAGGGACUUCACGUUGUGGCUUGAAGUUGUAGGGAACUCUUGUUGGUAGAUAGUGGCUCCAUACACAACUUUAUCAACACCAACAUUGUUGCUAAGGUUGGGUUGAAG