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BaseInfo

ncRNA ID novel_jre_miR1025
Species Juglans regia
Class miRNA
Genome position NW_017389966.1:339820-339894 [-]
Reference genome wgs.5d
Source SRR1168795
Length 22
Mature sequence(if miRNA) 54 - CGUGGUGUUGGUUUGGCUCAUC - 75
Stem-loop(if miRNA) --C                     UCAG    UCUUCU
   GUGGUGUUGGUUUGGCUCAUC    CUCG      A
   |||||||||||||||||||||    ||||      C
   CACUAUAACCAAGCCGAGUAG    GAGU      A
UCU                     --CA    CUCCUA
Stem-loop sequence CGUGGUGUUGGUUUGGCUCAUCUCAGCUCGUCUUCUACAAUCCUCUGAGACGAUGAGCCGAACCAAUAUCACUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018987572.1
ncRNA:22   CUACUCGGUUUGGUUGUGGUGC   1
  ***|||=||||||||||||*||
targets:363   UUGGAGUCAAACCAACACCUCG   384

2.5 PREDICTED: Juglans regia cathepsin B-like (LOC109007754), mRNA NA coding protein psRNATarget