ncRNA ID | novel_jre_miR1025 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389966.1:339820-339894 [-] |
Reference genome | wgs.5d |
Source | SRR1168795 |
Length | 22 |
Mature sequence(if miRNA) | 54 - CGUGGUGUUGGUUUGGCUCAUC - 75 |
Stem-loop(if miRNA) |
--C                     UCAG    UCUUCU    GUGGUGUUGGUUUGGCUCAUC    CUCG      A    |||||||||||||||||||||    ||||      C    CACUAUAACCAAGCCGAGUAG    GAGU      A UCU                     --CA    CUCCUA |
Stem-loop sequence | CGUGGUGUUGGUUUGGCUCAUCUCAGCUCGUCUUCUACAAUCCUCUGAGACGAUGAGCCGAACCAAUAUCACUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018987572.1 |
|
2.5 | PREDICTED: Juglans regia cathepsin B-like (LOC109007754), mRNA | NA | coding protein | psRNATarget |