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BaseInfo

ncRNA ID	novel_jre_miR1021
Species	Juglans regia
Class	miRNA
Genome position	NW_017389709.1:146418-146568 [+]
Reference genome	wgs.5d
Source	SRR1168795
Length	24
Mature sequence(if miRNA)	128 - UUUGCGCAUUCCACGACUGUACGU - 151
Stem-loop(if miRNA)	--U          -                                 AAUAAAUAAA    AGACUCGCAUGAAAAG    UACAGUCGUG AGUGUGCAAGCGUCGUGCAGUCGUUUUGAAAAA          UAUG                A    |||||||||| |||||||||||||||||||||||||||||||||          ||||    AUGUCAGCAC UUACGCGUUUGCGGCACGUUAGCAAAACUUUUU          AGUU                A UGC          C                                 --CUCAUCCC    GAUAAUUUUUUAAUUA
Stem-loop sequence	UUACAGUCGUGAGUGUGCAAGCGUCGUGCAGUCGUUUUGAAAAAAAUAAAUAAAUAUGAGACUCGCAUGAAAAGAAAUUAAUUUUUUAAUAGUUGACCCUACUCUUUUUCAAAACGAUUGCACGGCGUUUGCGCAUUCCACGACUGUACGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018983089.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||||||=||||||||||||||||| targets:281   ACGUACGGUCGUGGAAUGCGCAAA   304 Target Full Sequence	1.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018983090.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||||||=||||||||||||||||| targets:281   ACGUACGGUCGUGGAAUGCGCAAA   304 Target Full Sequence	1.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018983086.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||||||=||||||||||||||||| targets:281   ACGUACGGUCGUGGAAUGCGCAAA   304 Target Full Sequence	1.0	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018974968.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||||||||||*|||||||||| targets:1096   ACAUACAGUCGUGAAAUGCGCAAA   1119 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget
XM_018994468.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||||||||||||=|||||||= targets:1431   ACAUACAGUCGUGGAGUGCGCAAG   1454 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018967640.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||=|||||||||||||*|||| targets:2076   ACAUAUAGUCGUGGAAUGCUCAAA   2099 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018967641.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||=|||||||||||||*|||| targets:2126   ACAUAUAGUCGUGGAAUGCUCAAA   2149 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018964869.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||||||=*||||||||||||= targets:1058   ACAUACAGUUAUGGAAUGCGCAAG   1081 Target Full Sequence	3.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC108990784), mRNA	NA	coding protein	psRNATarget
XM_018980788.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||||||=*||||||||||||= targets:1587   ACAUACAGUUAUGGAAUGCGCAAG   1610 Target Full Sequence	3.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018980787.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||||||=*||||||||||||= targets:1660   ACAUACAGUUAUGGAAUGCGCAAG   1683 Target Full Sequence	3.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018980786.1	ncRNA:24   UGCAUGUCAGCACCUUACGCGUUU   1   ||*||||||=*||||||||||||= targets:1884   ACAUACAGUUAUGGAAUGCGCAAG   1907 Target Full Sequence	3.0	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X1, mRNA	NA	coding protein	psRNATarget