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BaseInfo

ncRNA ID novel_jre_miR1020
Species Juglans regia
Class miRNA
Genome position NW_017443571.1:244943-245091 [-]
Reference genome wgs.5d
Source SRR1168883
Length 24
Mature sequence(if miRNA) 126 - AUCAUCAUCGUGGGUCGGAGAUGA - 149
Stem-loop(if miRNA) --    UCA          GA  UGAC      CU         CU   --------U  A       -----    A   A
  AUCA   UCGUGGGUCG  GA    UCUUUC  CCAUUUUGG  UGU         GU CGAUUUU     UGAC UUA C
  ||||   ||||||||||  ||    ||||||  |||||||||  |||         || |||||||     |||| ||| A
  UGGU   AGUGCUCAGC  CU    AGGAAG  GGUAAAACC  ACA         CA GCUAGAG     GCUG GAU G
UC    -CG          UC  UAGC      AG         -C   UCUAUUAUU  -       UAUUU    C   U
Stem-loop sequence AUCAUCAUCGUGGGUCGGAGAUGACUCUUUCCUCCAUUUUGGCUUGUUGUACGAUUUUUGACAUUAACAGUUAGCGUCGUUUAUGAGAUCGACUUAUUAUCUACACCCAAAAUGGGAGAAGGACGAUUCCUCGACUCGUGAGCUGGUCU