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BaseInfo

ncRNA ID novel_jre_miR1019
Species Juglans regia
Class miRNA
Genome position NW_017443373.1:119327-119482 [+]
Reference genome wgs.5d
Source SRR1168883
Length 23
Mature sequence(if miRNA) 134 - CCUUGGUCUUGGUGUAAACUCCC - 156
Stem-loop(if miRNA) --   CA   C            A        A U  A          A      CA   UAGACCACUUUCAUACUG
  GAG  UAC ACCAAGACCAAG CUUUUACC C UG GCCAACUCCU GGGGUU  AAU                  G
  |||  ||| |||||||||||| |||||||| | || |||||||||| ||||||  |||                  U
  CUC  AUG UGGUUCUGGUUC GAAAGUGG G AC CGGUUGGGGA CCCCAA  AUU                  C
CC   AA   -            C        C U  C          A      UA   CGCAACUAAUACAUUAUU
Stem-loop sequence GAGCAUACCACCAAGACCAAGACUUUUACCACUUGAGCCAACUCCUAGGGGUUCAAAUUAGACCACUUUCAUACUGGUCUUAUUACAUAAUCAACGCUUAAUAACCCCAAGGGGUUGGCCCAUGCGGUGAAAGCCUUGGUCUUGGUGUAAACUCCC