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BaseInfo

ncRNA ID novel_jre_miR1018
Species Juglans regia
Class miRNA
Genome position NW_017443268.1:710397-710598 [+]
Reference genome wgs.5d
Source SRR1168883
Length 23
Mature sequence(if miRNA) 180 - CUCACCUGAGGAUUGGAUAGCUU - 202
Stem-loop(if miRNA) --                    AG                               A    A       A             U     A         ACA
  GCUAUCCAAUCCUUAGGUGA  AUAAUCCCAACCUGGAGUAAGAACUUGUUUU AUUC GAAUAAC UCUAUUUGGUAAC AGGAU AGGUUAUUC   G
  ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||| |||||||||
  CGAUAGGUUAGGAGUCCACU  UAUUGGGGUUGGACCUUAUUCUUGAACAAAA UAGG CUUAUUG AGAUAAACCAUUG UCCUA UCCAAUAGG   A
UU                    CU                               A    C       C             U     A         AUC
Stem-loop sequence GCUAUCCAAUCCUUAGGUGAAGAUAAUCCCAACCUGGAGUAAGAACUUGUUUUAAUUCAGAAUAACAUCUAUUUGGUAACUAGGAUAAGGUUAUUCACAGACUAGGAUAACCUAAUCCUUGUUACCAAAUAGACGUUAUUCCGGAUAAAAACAAGUUCUUAUUCCAGGUUGGGGUUAUUCUCACCUGAGGAUUGGAUAGCUU