ncRNA ID | novel_jre_miR1018 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443268.1:710397-710598 [+] |
Reference genome | wgs.5d |
Source | SRR1168883 |
Length | 23 |
Mature sequence(if miRNA) | 180 - CUCACCUGAGGAUUGGAUAGCUU - 202 |
Stem-loop(if miRNA) |
--                    AG                               A    A       A             U     A         ACA   GCUAUCCAAUCCUUAGGUGA  AUAAUCCCAACCUGGAGUAAGAACUUGUUUU AUUC GAAUAAC UCUAUUUGGUAAC AGGAU AGGUUAUUC   G   ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||| |||||||||   CGAUAGGUUAGGAGUCCACU  UAUUGGGGUUGGACCUUAUUCUUGAACAAAA UAGG CUUAUUG AGAUAAACCAUUG UCCUA UCCAAUAGG   A UU                    CU                               A    C       C             U     A         AUC |
Stem-loop sequence | GCUAUCCAAUCCUUAGGUGAAGAUAAUCCCAACCUGGAGUAAGAACUUGUUUUAAUUCAGAAUAACAUCUAUUUGGUAACUAGGAUAAGGUUAUUCACAGACUAGGAUAACCUAAUCCUUGUUACCAAAUAGACGUUAUUCCGGAUAAAAACAAGUUCUUAUUCCAGGUUGGGGUUAUUCUCACCUGAGGAUUGGAUAGCUU |