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BaseInfo

ncRNA ID	novel_jre_miR1007
Species	Juglans regia
Class	miRNA
Genome position	NW_017389860.1:1829658-1829772 [+]
Reference genome	wgs.5d
Source	SRR1168883
Length	24
Mature sequence(if miRNA)	92 - UUUCAAAGUGAUUGCACGGCGCUU - 115
Stem-loop(if miRNA)	--  A                   -------------       A  UC   UAU      AUUA   GC CCGUGCAGUCACUUUGAAA             AAGAGUG GA  UAC   UAAAAA    A   || |||||||||||||||||||             ||||||| ||  |||   ||||||   CG GGCACGUUAGUGAAACUUU             UUUUUGC CU  GUG   AUUUUU    U UU  C                   AUUAAUUUAUUUA       C  GA   --U      CUUU
Stem-loop sequence	GCACCGUGCAGUCACUUUGAAAAAGAGUGAGAUCUACUAUUAAAAAAUUAAUUUUCUUUUUAUGUGAGUCCCGUUUUUAUUUAUUUAAUUAUUUCAAAGUGAUUGCACGGCGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994468.1	ncRNA:24   UUCGCGGCACGUUAGUGAAACUUU   1   |||=*|||||||=||||||||||| targets:1452   AAGUACCGUGCAGUCACUUUGAAA   1475 Target Full Sequence	1.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018952930.1	ncRNA:24   UUCGCGGCACGUUAGUGAAACUUU   1   |||||||*||||=||||||||||| targets:3183   AAGCGCCUUGCAGUCACUUUGAAA   3206 Target Full Sequence	2.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018952929.1	ncRNA:24   UUCGCGGCACGUUAGUGAAACUUU   1   |||||||*||||=||||||||||| targets:3186   AAGCGCCUUGCAGUCACUUUGAAA   3209 Target Full Sequence	2.5	PREDICTED: Juglans regia pullulanase 1, chloroplastic (LOC108981688), transcript variant X1, mRNA	NA	coding protein	psRNATarget