ncRNA ID | novel_jre_miR998 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389069.1:311568-311789 [+] |
Reference genome | wgs.5d |
Source | SRR1168881 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUUCGUGAGACAGAAGACCUUC - 24 |
Stem-loop(if miRNA) |
--                AG               A    -AAAA             -C                UC    CACC        UC               A   AUUUUCGUGAGACAGA  ACCUUCUUGUUCUUU AAAA     AAUCUUUUAUUUU  UUUUCAAUAAAAAAAA  AUGU    GUCGGUAU  GGUUUGGUGUGUCAA C   ||||||||||||||||  ||||||||||||||| ||||     |||||||||||||  ||||||||||||||||  ||||    ||||||||  ||||||||||||||| G   UAAAAGUAUUCUGUCU  UGGAAGAAUAAGAGA UUUU     UUAGAAAAUAAAA  AAAAGUUAUUUUUUUU  UACA    CAGCUAUG  CUAAACCACGCAGUU G AU                AA               G    AAAAG             AU                -U    AUCA        CA               C |
Stem-loop sequence | AUUUUCGUGAGACAGAAGACCUUCUUGUUCUUUAAAAAAAAAAAUCUUUUAUUUUCUUUUCAAUAAAAAAAAUCAUGUCACCGUCGGUAUUCGGUUUGGUGUGUCAAACGGCUUGACGCACCAAAUCACGUAUCGACACUAACAUUUUUUUUUUAUUGAAAAUAAAAAUAAAAGAUUGAAAAUUUUGAGAGAAUAAGAAGGUAAUCUGUCUUAUGAAAAUUA |