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BaseInfo

ncRNA ID	novel_jre_miR993
Species	Juglans regia
Class	miRNA
Genome position	NW_017443571.1:709060-709267 [+]
Reference genome	wgs.5d
Source	SRR1168881
Length	24
Mature sequence(if miRNA)	185 - AAUUCUCAUCUCACCUCCAAACCU - 208
Stem-loop(if miRNA)	--                   CACAAAAUUUUCAUCUUAUCUCAUCUCAUCAUUACAC     UCAAAUUCUCAUAUAAAAUAUAAUAAAUAAUUCAACUUUUUCAAAUCUCAAUU   GUUUGGGGGUGGGAUGAGA                                     AUUUU                                                     C   |||||||||||||||||||                                     |||||   CAAACCUCCACUCUACUCU                                     AAAAU                                                     A UC                   ------------------------UAAAACACAAAAC     CACAAAUUUUAUAAUACAAAAUCAUAAUAAUAACAUAACCCUAAACUUUUUCA
Stem-loop sequence	GUUUGGGGGUGGGAUGAGACACAAAAUUUUCAUCUUAUCUCAUCUCAUCAUUACACAUUUUUCAAAUUCUCAUAUAAAAUAUAAUAAAUAAUUCAACUUUUUCAAAUCUCAAUUCAACUUUUUCAAAUCCCAAUACAAUAAUAAUACUAAAACAUAAUAUUUUAAACACUAAAACAAAACACAAAAUUCUCAUCUCACCUCCAAACCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018997379.1	ncRNA:24   UCCAAACCUCCACUCUACUCUUAA   1   ||||||||=|*||||||||||||| targets:1105   AGGUUUGGGGAUGAGAUGAGAAUU   1128 Target Full Sequence	2.0	PREDICTED: Juglans regia oil body-associated protein 2C-like (LOC109014886), mRNA	NA	coding protein	psRNATarget