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BaseInfo

ncRNA ID	novel_jre_miR988
Species	Juglans regia
Class	miRNA
Genome position	NW_017443530.1:263502-263620 [+]
Reference genome	wgs.5d
Source	SRR1168881
Length	21
Mature sequence(if miRNA)	99 - CAGUUGCCCACCAUGAACAGU - 119
Stem-loop(if miRNA)	--             UG  G       U  -AAUU   G     - UG    --- A    A   UGUUCAUGGUGGG  AC GGCAGAG GG     UCU CUGUU C  UUCA   C CCCC U   |||||||||||||  || ||||||| ||     ||| ||||| |  ||||   | ||||   ACAAGUACCACCC  UG CCGUUUC CC     AGG GGUAG G  GAGU   G GGGG G UG             GU  A       C  CCCCU   A     U GU    AGA C    G
Stem-loop sequence	UGUUCAUGGUGGGUGACGGGCAGAGUGGAAUUUCUGCUGUUCUGUUCACACCCCAUGGGGGGCGAGAUGAGUGGUGAUGGAGGAUCCCCCCCCUUUGCCAGUUGCCCACCAUGAACAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018998914.1	ncRNA:21   UGACAAGUACCACCCGUUGAC   1   |=|||||*|||||||*||||| targets:996   AUUGUUCUUGGUGGGGAACUG   1016 Target Full Sequence	2.5	PREDICTED: Juglans regia proton pump-interactor 1-like (LOC109016506), mRNA	NA	coding protein	psRNATarget
XM_018977434.1	ncRNA:21   UGACAAGUACCACCCGUUGAC   1   |=|||||*|||||||*||||| targets:4323   AUUGUUCUUGGUGGGGAACUG   4343 Target Full Sequence	2.5	PREDICTED: Juglans regia calponin homology domain-containing protein DDB_G0272472-like (LOC109000522), mRNA	NA	coding protein	psRNATarget
XM_018982794.1	ncRNA:21   UGACAAGUACCACCCGUUGAC   1   *=||*|==||||||||||||| targets:672   CUUGCUUGUGGUGGGCAACUG   692 Target Full Sequence	3.0	PREDICTED: Juglans regia lysine histidine transporter-like 8 (LOC109004285), partial mRNA	NA	coding protein	psRNATarget
XM_018998349.1	ncRNA:21   UGACAAGUACCACCCGUUGAC   1   *=||*|==||||||||||||| targets:1297   CUUGCUUGUGGUGGGCAACUG   1317 Target Full Sequence	3.0	PREDICTED: Juglans regia lysine histidine transporter-like 8 (LOC109015900), partial mRNA	NA	coding protein	psRNATarget