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BaseInfo

ncRNA ID	novel_jre_miR987
Species	Juglans regia
Class	miRNA
Genome position	NW_017443523.1:89606-89821 [+]
Reference genome	wgs.5d
Source	SRR1168881
Length	23
Mature sequence(if miRNA)	194 - UUUUUUUAAAAUGAUUGCACGGU - 216
Stem-loop(if miRNA)	--CA                    ---------   A    U  -  UU  A          C  UU  U    -  UCAUA         A  -----   C  AUU     UUAU     UGCAGUCGUUUUGAAAAAGA         GUG AAUC AC UG  AA AAAUUAAUUU UU  CA GUGG UC     UUACUUUUU UC     GUA AG   UUUUA    A     ||||||||||||||||||||         ||| |||| || ||  || |||||||||| ||  || |||| ||     ||||||||| ||     ||| ||   |||||    U     ACGUUAGUAAAAUUUUUUUU         UAU UUAG UG AC  UU UUUAAUUAAA AA  GU CAUC AG     AGUGAGAAA AG     CAU UC   AAAGU    A UGGC                    AUUUAUUUA   C    -  U  UU  C          A  UU  -    U  CUACA         A  UUUUA   -  AUU     UCAC
Stem-loop sequence	CAUGCAGUCGUUUUGAAAAAGAGUGAAAUCUACUGUUAAAAAAUUAAUUUCUUUUCAUGUGGUCUCAUAUUACUUUUUAUCGUACAGAUUUUUUAUUAUAUACACUUGAAAUUACUUACAUUUUGAAAAAGAGUGAACAUCGAUCUACUGUUAAAAAAUUAAUUUCUUUUCAUGUGAUUCUAUAUUUAUUUAUUUUUUUUAAAAUGAUUGCACGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018989745.1	ncRNA:23   UGGCACGUUAGUAAAAUUUUUUU   1   ==|*||||||||||||=|||||| targets:1398   GUCAUGCAAUCAUUUUGAAAAAA   1420 Target Full Sequence	1.5	PREDICTED: Juglans regia probable uridine nucleosidase 2 (LOC109009305), mRNA	NA	coding protein	psRNATarget
XM_018956793.1	ncRNA:23   UGGCACGUUAGUAAAAUUUUUUU   1   ===||*||||||||||||||||* targets:1334   GUUGUACAAUCAUUUUAAAAAAU   1356 Target Full Sequence	2.0	PREDICTED: Juglans regia probable long-chain-alcohol O-fatty-acyltransferase 5 (LOC108984746), mRNA	NA	coding protein	psRNATarget
XM_018983883.1	ncRNA:23   UGGCACGUUAGUAAAAUUUUUUU   1   =||*|||*|||||||||*||||| targets:451   GCCUUGCUAUCAUUUUACAAAAA   473 Target Full Sequence	2.5	PREDICTED: Juglans regia putative calcium-transporting ATPase 13, plasma membrane-type (LOC109005095), mRNA	NA	coding protein	psRNATarget
XM_018986526.1	ncRNA:23   UGGCACGUUAGUAAAAUUUUUUU   1   |***|||||*||||||||=|||| targets:37   AGAUUGCAAGCAUUUUAAGAAAA   59 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized protein At1g10890 (LOC109007036), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018985679.1	ncRNA:23   UGGCACGUUAGUAAAAUUUUUUU   1   ==|*||||*||*||||||||||| targets:833   GUCAUGCACUCCUUUUAAAAAAA   855 Target Full Sequence	2.5	PREDICTED: Juglans regia probable WRKY transcription factor 24 (LOC109006411), mRNA	NA	coding protein	psRNATarget