Search result

BaseInfo

ncRNA ID novel_jre_miR986
Species Juglans regia
Class miRNA
Genome position NW_017443519.1:1310398-1310523 [-]
Reference genome wgs.5d
Source SRR1168881
Length 24
Mature sequence(if miRNA) 1 - AUGACUGUACGAUACUUGCACACU - 24
Stem-loop(if miRNA) --UA      CG       A            U   UAAAUAAA  UAGGAUUUAUGUAAAAAAAA
    UGCAAG  UUGUACA UUAUUUUAAAAA AAA        UA                    A
    ||||||  ||||||| |||||||||||| |||        ||                    U
    ACGUUC  AGCAUGU AGUAAAAUUUUU UUU        AC                    U
UCAC      AU       C            U   -------C  UCCAGUUAAUAAUGUUUUAA
Stem-loop sequence UAUGCAAGCGUUGUACAAUUAUUUUAAAAAUAAAUAAAUAAAUAUAGGAUUUAUGUAAAAAAAAAUUAAUUUUGUAAUAAUUGACCUCACUUUUUUUUUAAAAUGACUGUACGAUACUUGCACACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018959423.1
ncRNA:24   UCAC----ACGUUCAUAGCAUGUCAGUA   1
  *|||----||=||*|||||||||||||*
targets:487   CGUGAAUAUGUAAAUAUCGUACAGUCAC   514

3.0 PREDICTED: Juglans regia high-affinity nitrate transporter 3.1-like (LOC108986715), mRNA NA coding protein psRNATarget