ncRNA ID | novel_jre_miR985 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443516.1:756108-756215 [-] |
Reference genome | wgs.5d |
Source | SRR1168881;SRR1168884 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUCAAAGUGAUUGCGCGGCACUU - 24 |
Stem-loop(if miRNA) |
--    UA A               A     ---------   -     U  U      U   GUGC  U CAGUCAUUUUGAAAA GAGUG         GAG UCUAC AU AAAAAA U   ||||  | ||||||||||||||| |||||         ||| ||||| || ||||||   CACG  G GUUAGUGAAACUUUU UUCAC         CUC GGGUG UA UUUUUU A UU    GC C               -     UUAUUUAUG   U     -  C      A |
Stem-loop sequence | GUGCUAUACAGUCAUUUUGAAAAAGAGUGGAGUCUACUAUUAAAAAAUUAAUUUUUUCAUGUGGGUCUCGUAUUUAUUCACUUUUUUCAAAGUGAUUGCGCGGCACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018994468.1 |
|
2.5 | PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018987355.1 |
|
2.5 | PREDICTED: Juglans regia 7-deoxyloganetin glucosyltransferase-like (LOC109007610), mRNA | NA | coding protein | psRNATarget |