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BaseInfo

ncRNA ID	novel_jre_miR980
Species	Juglans regia
Class	miRNA
Genome position	NW_017442692.1:31838-31947 [+]
Reference genome	wgs.5d
Source	SRR1168881
Length	24
Mature sequence(if miRNA)	87 - UUUCAAAGCGAUUGCACGGCGUUU - 110
Stem-loop(if miRNA)	--                          ---------   A GU    UAUU   A  U   AUGCCGUGCAGUCGCUUUGAAAAAAA         GUG G  CUAC    AAA AA U   ||||||||||||||||||||||||||         ||| |  ||||    ||| || U   UGCGGCACGUUAGCGAAACUUUUUUU         UAC C  GGUG    UUU UU A UU                          AUUUAUUUA   C UG    UGCU   C  U
Stem-loop sequence	AUGCCGUGCAGUCGCUUUGAAAAAAAGUGAGGUCUACUAUUAAAAAAUUUAUUUCUUUUCGUGUGGGUCCCAUAUUUAUUUAUUUUUUUCAAAGCGAUUGCACGGCGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018980788.1	ncRNA:24   UUUGCGGCACGUUAGCGAAACUUU   1   ||=|||||||||=||||||||||| targets:1608   AAGCGCCGUGCAGUCGCUUUGAAA   1631 Target Full Sequence	1.5	PREDICTED: Juglans regia histone-lysine N-methyltransferase ATXR2-like (LOC109002870), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018987355.1	ncRNA:24   UUUGCGGCACGUUAGCGAAACUUU   1   ||*|||||*|=||||||||||||| targets:1848   AACCGCCGCGUAAUCGCUUUGAAA   1871 Target Full Sequence	2.0	PREDICTED: Juglans regia 7-deoxyloganetin glucosyltransferase-like (LOC109007610), mRNA	NA	coding protein	psRNATarget
XM_018953401.1	ncRNA:24   UUUGCGGCACGUUAGCGAAACUUU   1   ||*|||||*|=||||||||||||| targets:2311   AACCGCCGCGUAAUCGCUUUGAAA   2334 Target Full Sequence	2.0	PREDICTED: Juglans regia receptor protein kinase CLAVATA1-like (LOC108982113), mRNA	NA	coding protein	psRNATarget
XM_018970092.1	ncRNA:24   UUUGCGGCACGUUAGCGAAACUUU   1   |||||||*||||=||||||||||| targets:3745   AAACGCCUUGCAGUCGCUUUGAAA   3768 Target Full Sequence	2.5	PREDICTED: Juglans regia translation initiation factor eIF-2B subunit epsilon (LOC108994766), transcript variant X6, mRNA	NA	coding protein	psRNATarget