ncRNA ID | novel_jre_miR975 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017441211.1:30211-30324 [+] |
Reference genome | wgs.5d |
Source | SRR1168881 |
Length | 24 |
Mature sequence(if miRNA) | 91 - AAUAAUCCGUCAUAAAUACUCGUU - 114 |
Stem-loop(if miRNA) |
--U UU          UA       C U  AAA           CCUAUU     GA    G  UAUUUGUGAC  AUUAUUU U GC   AAUGAUUAUUU      AAAAU  G    |  ||||||||||  ||||||| | ||   |||||||||||      |||||    C  AUAAAUACUG  UAAUAAA A UG   UUACUGAUAAA      UUUUG  U UUG UC          CC       C C  CUG           CACUGU     UC |
Stem-loop sequence | UGUUUAUUUGUGACUAAUUAUUUCUUGCAAAAAUGAUUAUUUCCUAUUAAAAUGAGUCUGUUUUUGUCACAAAUAGUCAUUGUCGUCACAAAUAAUCCGUCAUAAAUACUCGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018969796.1 |
|
1.5 | PREDICTED: Juglans regia zinc finger protein CONSTANS-LIKE 16-like (LOC108994549), mRNA | NA | coding protein | psRNATarget |