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BaseInfo

ncRNA ID novel_jre_miR974
Species Juglans regia
Class miRNA
Genome position NW_017440576.1:123240-123353 [-]
Reference genome wgs.5d
Source SRR1168881
Length 20
Mature sequence(if miRNA) 1 - CUUGCACAACCUAUGACUGU - 20
Stem-loop(if miRNA) --            CU    C  CACG    C  UUU        GAGUAA  A  A
  AGUUAUAGGUUG  CAAG GU    CAUU UU   GAAAAAAU      AU UG G
  ||||||||||||  |||| ||    |||| ||   ||||||||      || || A
  UCAGUAUCCAAC  GUUC CG    GUAG AA   UUUUUUUA      UA AC U
UG            AC    A  -CAA    C  UUU        AAAAAG  A  C
Stem-loop sequence AGUUAUAGGUUGCUCAAGCGUCACGCAUUCUUUUUGAAAAAAUGAGUAAAUAUGAGAUCCAAAUGAAAAAAUUUUUUUUUUAACGAUGAACGCACUUGCACAACCUAUGACUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018988759.1
ncRNA:20   UGUCAGUAUCCAACACGUUC   1
  *||*|=|||||||||||||*
targets:325   UCAAUUAUAGGUUGUGCAAA   344

3.0 PREDICTED: Juglans regia uncharacterized LOC109008595 (LOC109008595), transcript variant X1, mRNA NA coding protein psRNATarget
XM_018988766.1
ncRNA:20   UGUCAGUAUCCAACACGUUC   1
  *||*|=|||||||||||||*
targets:325   UCAAUUAUAGGUUGUGCAAA   344

3.0 PREDICTED: Juglans regia uncharacterized LOC109008595 (LOC109008595), transcript variant X2, mRNA NA coding protein psRNATarget