ncRNA ID | novel_jre_miR974 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017440576.1:123240-123353 [-] |
Reference genome | wgs.5d |
Source | SRR1168881 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CUUGCACAACCUAUGACUGU - 20 |
Stem-loop(if miRNA) |
--            CU    C  CACG    C  UUU        GAGUAA  A  A   AGUUAUAGGUUG  CAAG GU    CAUU UU   GAAAAAAU      AU UG G   ||||||||||||  |||| ||    |||| ||   ||||||||      || || A   UCAGUAUCCAAC  GUUC CG    GUAG AA   UUUUUUUA      UA AC U UG            AC    A  -CAA    C  UUU        AAAAAG  A  C |
Stem-loop sequence | AGUUAUAGGUUGCUCAAGCGUCACGCAUUCUUUUUGAAAAAAUGAGUAAAUAUGAGAUCCAAAUGAAAAAAUUUUUUUUUUAACGAUGAACGCACUUGCACAACCUAUGACUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018988759.1 |
|
3.0 | PREDICTED: Juglans regia uncharacterized LOC109008595 (LOC109008595), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018988766.1 |
|
3.0 | PREDICTED: Juglans regia uncharacterized LOC109008595 (LOC109008595), transcript variant X2, mRNA | NA | coding protein | psRNATarget |