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BaseInfo

ncRNA ID	novel_jre_miR969
Species	Juglans regia
Class	miRNA
Genome position	NW_017439574.1:24371-24461 [+]
Reference genome	wgs.5d
Source	SRR1168881
Length	24
Mature sequence(if miRNA)	68 - AUCAUAUCAAGCCACGUCAGUUUG - 91
Stem-loop(if miRNA)	--    A     AU  C  C    CC       --CUACU    AA   AAUU ACGUG  UU AU UGAU  GUUAGAU       UUAU  U   |||| |||||  || || ||||  |||||||       ||||  A   UUGA UGCAC  AA UA ACUA  CAGUCUA       AAUA  A GU    C     CG  C  U    AA       ACAUUCC    AA
Stem-loop sequence	AAUUAACGUGAUUUCAUCUGAUCCGUUAGAUCUACUUUAUAAUAAAAAUAACCUUACAAUCUGACAAAUCAUAUCAAGCCACGUCAGUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018953759.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   ||||||||=|||||||||||||=| targets:1277   CAAACUGAUGUGGCUUGAUAUGGU   1300 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108982392 (LOC108982392), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018953758.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   ||||||||=|||||||||||||=| targets:1569   CAAACUGAUGUGGCUUGAUAUGGU   1592 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108982392 (LOC108982392), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018953757.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   ||||||||=|||||||||||||=| targets:1603   CAAACUGAUGUGGCUUGAUAUGGU   1626 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized LOC108982392 (LOC108982392), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018972649.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   =|||=|||=||||||*|||||||| targets:3010   UAAAUUGAUGUGGCUAGAUAUGAU   3033 Target Full Sequence	2.5	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC108996643), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018972650.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   =|||=|||=||||||*|||||||| targets:3064   UAAAUUGAUGUGGCUAGAUAUGAU   3087 Target Full Sequence	2.5	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC108996643), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018972647.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   =|||=|||=||||||*|||||||| targets:3278   UAAAUUGAUGUGGCUAGAUAUGAU   3301 Target Full Sequence	2.5	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC108996643), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018972648.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   =|||=|||=||||||*|||||||| targets:3278   UAAAUUGAUGUGGCUAGAUAUGAU   3301 Target Full Sequence	2.5	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC108996643), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018972646.1	ncRNA:24   GUUUGACUGCACCGAACUAUACUA   1   =|||=|||=||||||*|||||||| targets:3350   UAAAUUGAUGUGGCUAGAUAUGAU   3373 Target Full Sequence	2.5	PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC108996643), transcript variant X1, mRNA	NA	coding protein	psRNATarget