ncRNA ID | novel_jre_miR967 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017437386.1:20020-20143 [-] |
Reference genome | wgs.5d |
Source | SRR1168881 |
Length | 23 |
Mature sequence(if miRNA) | 102 - UUUUGUCAUCCUCAGUCACACGU - 124 |
Stem-loop(if miRNA) |
--           UC       C  A   -   C              --A      AUGCCA   UUUUGUCAUCC  AGUCACA GU CCA UGU ACACAUUUUAGGUG   UUUCAU      U   |||||||||||  ||||||| || ||| ||| ||||||||||||||   ||||||      C   AAAACAGUAGG  UCAGUGU UA GGU AUA UGUGUAAAAUUCAC   AAAGUA      C CU           GA       U  C   U   C              CGA      GAUUAA |
Stem-loop sequence | UUUUGUCAUCCUCAGUCACACGUACCAUGUCACACAUUUUAGGUGAUUUCAUAUGCCAUCCAAUUAGAUGAAAAGCCACUUAAAAUGUGUCAUAUUGGCAUUUGUGACUAGGGAUGACAAAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018968421.1 |
|
1.5 | PREDICTED: Juglans regia uncharacterized LOC108993487 (LOC108993487), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018966112.1 |
|
2.5 | PREDICTED: Juglans regia outer envelope pore protein 24, chloroplastic (LOC108991734), mRNA | NA | coding protein | psRNATarget |