ncRNA ID | novel_jre_miR960 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017433573.1:238-305 [+] |
Reference genome | wgs.5d |
Source | SRR1168881 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AGUCCUCGUGUUGCAUCCCU - 20 |
Stem-loop(if miRNA) |
--A    UC      -  --   -     UUUU  UU    GUCC  GUGUUG CA  UCC CUCGU    GU  U    ||||  |||||| ||  ||| |||||    ||  U    CAGG  UAUAAC GU  AGG GAGCG    CG  U CAC    --      A  UA   A     -UUC  CC |
Stem-loop sequence | AGUCCUCGUGUUGCAUCCCUCGUUUUUGUUUUUUCCGCCUUGCGAGAGGAAUUGACAAUAUGGACCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018993882.1 |
|
2.5 | PREDICTED: Juglans regia ubiquitin-conjugating enzyme E2 36 (LOC109012315), transcript variant X1, mRNA | NA | coding protein | psRNATarget |