ncRNA ID | novel_jre_miR958 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017391063.1:601-704 [-] |
Reference genome | wgs.5d |
Source | SRR1168881 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUUUAAAGUGACUGUACAGCC - 22 |
Stem-loop(if miRNA) |
--   GG                 ---------A     GU    UAUU   A  U   UUG  CAGUCGCUUUGAAAAAG          GUGAG  CUAC    AAA AA U   |||  |||||||||||||||||          |||||  ||||    ||| || A   GAC  GUCAGUGAAAUUUUUUU          UACUC  GGUG    UUU UU A CC   AU                 CACUUAUUUA     UG    CACU   C  U |
Stem-loop sequence | UUGGGCAGUCGCUUUGAAAAAGAGUGAGGUCUACUAUUAAAAAAUUAAUUUCUUUUCACGUGGGUCUCAUAUUUAUUCACUUUUUUUAAAGUGACUGUACAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018959423.1 |
|
2.5 | PREDICTED: Juglans regia high-affinity nitrate transporter 3.1-like (LOC108986715), mRNA | NA | coding protein | psRNATarget |