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BaseInfo

ncRNA ID novel_jre_miR956
Species Juglans regia
Class miRNA
Genome position NW_017389844.1:535607-535715 [-]
Reference genome wgs.5d
Source SRR1168881
Length 23
Mature sequence(if miRNA) 1 - UAUGGAUGAUAAGUAGAAUAACU - 23
Stem-loop(if miRNA) --A         C       U     CG    CCAAACAU  AAUUUUUUUAUUUUUU
   UAUUCUACU AUCAUCC UACAC  UACA        AU                U
   ||||||||| ||||||| |||||  ||||        ||                U
   AUAAGAUGA UAGUAGG AUGUG  AUGU        AG                A
UCA         A       U     --    ------UU  ACUACUCCCUUUUUUU
Stem-loop sequence AUAUUCUACUCAUCAUCCUUACACCGUACACCAAACAUAUAAUUUUUUUAUUUUUUUUAUUUUUUUCCCUCAUCAGAUUUGUAGUGUAUGGAUGAUAAGUAGAAUAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018979806.1
ncRNA:23   UCAAUAAGAUGAAUAGUAGGUAU   1
  ***|||||||||||||||||=|*
targets:1015   UUGUAUUCUACUUAUCAUCCGUU   1037

2.5 PREDICTED: Juglans regia uncharacterized LOC109002169 (LOC109002169), mRNA NA coding protein psRNATarget