ncRNA ID | novel_jre_miR948 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443598.1:715314-715395 [+] |
Reference genome | wgs.5d |
Source | SRR1170970 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUAUUUUAUUAAUGUAAUUGGCUG - 24 |
Stem-loop(if miRNA) |
--          A    AAU   CUGCAUCACUUUUCUUUA   GUAUUUUAUU AUGU   UGG                  A   |||||||||| ||||   |||                  U   CGUGAGAUGA UACA   AAU                  A UG          C    -CU   UAGUUUUAUUAAUAAAAU |
Stem-loop sequence | GUAUUUUAUUAAUGUAAUUGGCUGCAUCACUUUUCUUUAAUAUAAAAUAAUUAUUUUGAUUAAUCACAUCAGUAGAGUGCGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018958048.1 |
|
2.5 | PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC108985669), mRNA | NA | coding protein | psRNATarget |