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BaseInfo

ncRNA ID novel_jre_miR946
Species Juglans regia
Class miRNA
Genome position NW_017389344.1:126576-126721 [-]
Reference genome wgs.5d
Source SRR1168881
Length 29
Mature sequence(if miRNA) 1 - UAGGCCAAGUACACAAGACAUAGACGAGA - 29
Stem-loop(if miRNA) --        A UC     U      G                    -------------CCAUCA    UCAUCAACUA
  UUGUCUAU U  UGUGU ACUUGG CUAUUGCCUAUCCUUGUUGA                   AGUU          C
  |||||||| |  ||||| |||||| ||||||||||||||||||||                   ||||
  AGCAGAUA A  ACACA UGAACC GAUAACGGAUAGGAAUAAUU                   GUUU          C
AG        C GA     -      G                    UAUUUAAAACAAAUGUCUA    UCUCUUAAAA
Stem-loop sequence UUGUCUAUAUUCUGUGUUACUUGGGCUAUUGCCUAUCCUUGUUGACCAUCAAGUUUCAUCAACUACCAAAAUUCUCUUUUGAUCUGUAAACAAAAUUUAUUUAAUAAGGAUAGGCAAUAGGCCAAGUACACAAGACAUAGACGAGA