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BaseInfo

ncRNA ID novel_jre_miR945
Species Juglans regia
Class miRNA
Genome position NW_017443498.1:22170-22306 [+]
Reference genome wgs.5d
Source SRR1170970
Length 23
Mature sequence(if miRNA) 1 - ACACCAAACACCUCCACCUAACC - 23
Stem-loop(if miRNA) --      A   C          C            U    C        G       AAACA    CA
  ACACCA ACA CUCCACCUAA CAAUAUGUGGUU GUCA UUUUGCCC UCUAUUU     CACA  U
  |||||| ||| |||||||||| |||||||||||| |||| |||||||| |||||||     ||||
  UGUGGU UGU GAGGUGGAUU GUUGUACACUAA CAGU AAAACGGG AGAUAGA     GUGU  A
AA      G   A          A            -    A        G       GUUAC    UU
Stem-loop sequence ACACCAAACACCUCCACCUAACCAAUAUGUGGUUUGUCACUUUUGCCCGUCUAUUUAAACACACACAUAUUUGUGCAUUGAGAUAGAGGGGCAAAAAUGACAAUCACAUGUUGAUUAGGUGGAGAUGUGUGGUGUAA