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BaseInfo

ncRNA ID	novel_jre_miR941
Species	Juglans regia
Class	miRNA
Genome position	NW_017389401.1:60512-60617 [+]
Reference genome	wgs.5d
Source	SRR1168880
Length	24
Mature sequence(if miRNA)	83 - UUUCAAAAUGAUUGUACGGCGCUU - 106
Stem-loop(if miRNA)	--     U                    AU    UU   UAUUA    UAUUU   GUGCC UGCAAUCGUUUUGAAAAAAA  GAGA  UAC     UUAU     U   ||||| ||||||||||||||||||||  ||||  |||     ||||   CGCGG AUGUUAGUAAAACUUUUUUU  UUUU  AUG     GGUA     U UU     C                    AU    UU   UCCGG    UAUUU
Stem-loop sequence	GUGCCUUGCAAUCGUUUUGAAAAAAAAUGAGAUUUACUAUUAUUAUUAUUUUUUUUAUAUGGGGCCUGUAUUUUUUUAUUUUUUUCAAAAUGAUUGUACGGCGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018969255.1	ncRNA:24   UUCGCGGCAUGUUAGUAAAACUUU   1   *||||||||=||=||||||||||| targets:1914   CAGCGCCGUGCAGUCAUUUUGAAA   1937 Target Full Sequence	2.5	PREDICTED: Juglans regia CTP synthase-like (LOC108994151), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018998100.1	ncRNA:24   UUCGCGGCAUGUUAGUAAAACUUU   1   ||*=||||||=||||=|||||||| targets:813   AACUGCCGUAUAAUCGUUUUGAAA   836 Target Full Sequence	2.5	PREDICTED: Juglans regia pleiotropic drug resistance protein 1-like (LOC109015635), partial mRNA	NA	coding protein	psRNATarget
XM_018989745.1	ncRNA:24   UUCGCGGCAUGUUAGUAAAACUUU   1   |||=|=|*|=|||||||||||||| targets:1394   AAGUGUCAUGCAAUCAUUUUGAAA   1417 Target Full Sequence	3.0	PREDICTED: Juglans regia probable uridine nucleosidase 2 (LOC109009305), mRNA	NA	coding protein	psRNATarget