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BaseInfo

ncRNA ID	novel_jre_miR939
Species	Juglans regia
Class	miRNA
Genome position	NW_017443538.1:277774-277924 [-]
Reference genome	wgs.5d
Source	SRR1168795
Length	23
Mature sequence(if miRNA)	1 - UUGCACACUCCACGACUGUAAAU - 23
Stem-loop(if miRNA)	--A         A  U  A        C        A    AA          ----------       UAUU      U    UACAGUUGU GA UG GCAAGCGU GCGUAAUC CUUU  AAAUGAAUGA          AGUCUAU    AAAAAA U    ||||||||| || || |||||||| |||||||| ||||  ||||||||||          |||||||    ||||||    AUGUCAGCA CU AC CGUUCGUA CGUAUUAG GAAA  UUUAUUUAUU          UUAGAUG    UUUUUU A UAA         C  C  A        A        A    -C          CAUUUAUACC       UACU      A
Stem-loop sequence	AUACAGUUGUAGAUUGAGCAAGCGUCGCGUAAUCACUUUAAAAAUGAAUGAAGUCUAUUAUUAAAAAAUUAAUUUUUUUCAUGUAGAUUCCAUAUUUACUUAUUUAUUUCAAAGAGAUUAUGCAAUGCUUGCACACUCCACGACUGUAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018994468.1	ncRNA:23   UAAAUGUCAGCACCUCACACGUU   1   |**|||||||||||||||*|||| targets:1431   ACAUACAGUCGUGGAGUGCGCAA   1453 Target Full Sequence	1.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018958295.1	ncRNA:23   UAA---AUGUCAGCACCUCACACGUU   1   =||---|||=||=||||||||||||| targets:819   GUUACAUACGGUUGUGGAGUGUGCAA   844 Target Full Sequence	2.0	PREDICTED: Juglans regia ferredoxin, root R-B1-like (LOC108985851), mRNA	NA	coding protein	psRNATarget