ncRNA ID | novel_jre_miR934 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388856.1:2348860-2349015 [-] |
Reference genome | wgs.5d |
Source | SRR1170970 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUUGCACACUCUACGACUGUAUGU - 24 |
Stem-loop(if miRNA) |
--U               CU                -CC        A   AA  AAAUACGGGAUCCACAUGAAAAA    UGCAGUCGUAGAGUG  CAAGCGCCGUACAAUC   UUGGAAAA AGU  GU                       A    |||||||||||||||  ||||||||||||||||   |||||||| |||  ||                       A    AUGUCAGCAUCUCAC  GUUCGUGGUGUGUUAG   AACUUUUU UCA  CU                       A UGU               AC                CAA        C   CA  AUGUGAUAAUUUUUAAAACAAAA |
Stem-loop sequence | UUGCAGUCGUAGAGUGCUCAAGCGCCGUACAAUCCCUUGGAAAAAAGUAAGUAAAUACGGGAUCCACAUGAAAAAAAAAAAACAAAAUUUUUAAUAGUGUAUCACACUCUUUUUCAAAACGAUUGUGUGGUGCUUGCACACUCUACGACUGUAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018985674.1 |
|
2.5 | PREDICTED: Juglans regia proline iminopeptidase (LOC109006407), mRNA | NA | coding protein | psRNATarget |