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BaseInfo

ncRNA ID novel_jre_miR934
Species Juglans regia
Class miRNA
Genome position NW_017388856.1:2348860-2349015 [-]
Reference genome wgs.5d
Source SRR1170970
Length 24
Mature sequence(if miRNA) 1 - CUUGCACACUCUACGACUGUAUGU - 24
Stem-loop(if miRNA) --U               CU                -CC        A   AA  AAAUACGGGAUCCACAUGAAAAA
   UGCAGUCGUAGAGUG  CAAGCGCCGUACAAUC   UUGGAAAA AGU  GU                       A
   |||||||||||||||  ||||||||||||||||   |||||||| |||  ||                       A
   AUGUCAGCAUCUCAC  GUUCGUGGUGUGUUAG   AACUUUUU UCA  CU                       A
UGU               AC                CAA        C   CA  AUGUGAUAAUUUUUAAAACAAAA
Stem-loop sequence UUGCAGUCGUAGAGUGCUCAAGCGCCGUACAAUCCCUUGGAAAAAAGUAAGUAAAUACGGGAUCCACAUGAAAAAAAAAAAACAAAAUUUUUAAUAGUGUAUCACACUCUUUUUCAAAACGAUUGUGUGGUGCUUGCACACUCUACGACUGUAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018985674.1
ncRNA:24   UGUAUGUCAGCAUCUCACACGUUC   1
  |||||||*|||||||*||||||||
targets:1681   ACAUACAAUCGUAGAUUGUGCAAG   1704

2.5 PREDICTED: Juglans regia proline iminopeptidase (LOC109006407), mRNA NA coding protein psRNATarget