Search result

BaseInfo

ncRNA ID	novel_jre_miR933
Species	Juglans regia
Class	miRNA
Genome position	NW_017431598.1:3907-4096 [+]
Reference genome	wgs.5d
Source	SRR1170970
Length	24
Mature sequence(if miRNA)	167 - AUGACUUCUCUCUAACAUUACUCU - 190
Stem-loop(if miRNA)	--                  C  C    A             A      C         A             ---A   CAUUAUCUAGACUACA   AGUAAUGUUAGAGAGAGG CA UAUA UAGUGUAUAUUUU UACUCA UGCGUGACU CUUCUAGUUGAUU    UAG                C   |||||||||||||||||| || |||| ||||||||||||| |||||| ||||||||| |||||||||||||    |||                A   UCAUUACAAUCUCUCUUC GU AUAU GUCACAUAUGAAA GUGAGU AUGUACUGA GAAGAUCAACUAA    GGU                U UC                  A  A    C             C      A         C             CAAG   UGUGAGUGAACUUCUC
Stem-loop sequence	AGUAAUGUUAGAGAGAGGCCACUAUAAUAGUGUAUAUUUUAUACUCACUGCGUGACUACUUCUAGUUGAUUAUAGCAUUAUCUAGACUACACAUCUCUUCAAGUGAGUGUUGGGAACAAUCAACUAGAAGCAGUCAUGUAAUGAGUGCAAAGUAUACACUGCUAUAAUGACUUCUCUCUAACAUUACUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018959165.1	ncRNA:24   UCUCAUUACAAUCUCUCUUCAGUA   1   |*=|||||||||*||||||||||| targets:1713   ACGGUAAUGUUAAAGAGAAGUCAU   1736 Target Full Sequence	1.5	PREDICTED: Juglans regia protein MARD1-like (LOC108986517), mRNA	NA	coding protein	psRNATarget