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BaseInfo

ncRNA ID novel_jre_miR932
Species Juglans regia
Class miRNA
Genome position NW_017424160.1:782-895 [+]
Reference genome wgs.5d
Source SRR1170970
Length 19
Mature sequence(if miRNA) 96 - UUUAAUUUUAUCUUGGGCU - 114
Stem-loop(if miRNA) --  G    CUU          GGU   -   GUUU      UGA        U    GA
  CU AGGA   GGAUUAGAUU   GAG CAU    AAGCUG   GAGGAUGU AGAA  A
  || ||||   ||||||||||   ||| |||    ||||||   |||||||| ||||  G
  GG UUCU   UUUAAUUUAG   UUC GUA    UUUGAU   UUCCUGUA UCUU  G
UC  G    -AU          AUU   U   --AU      ---        U    AA
Stem-loop sequence CUGAGGACUUGGAUUAGAUUGGUGAGCAUGUUUAAGCUGUGAGAGGAUGUUAGAAGAAGGAAUUCUUAUGUCCUUUAGUUUUAAUGUCUUUUAGAUUUAAUUUUAUCUUGGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018967941.1
ncRNA:19   UCGGGUUCUAUUUUAAUUU   1
  =|=||||||||||||||||
targets:2129   GGUCCAAGAUAAAAUUAAA   2147

2.0 PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At2g23950 (LOC108993154), mRNA NA coding protein psRNATarget