ncRNA ID | novel_jre_miR932 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017424160.1:782-895 [+] |
Reference genome | wgs.5d |
Source | SRR1170970 |
Length | 19 |
Mature sequence(if miRNA) | 96 - UUUAAUUUUAUCUUGGGCU - 114 |
Stem-loop(if miRNA) |
--  G    CUU          GGU   -   GUUU      UGA        U    GA   CU AGGA   GGAUUAGAUU   GAG CAU    AAGCUG   GAGGAUGU AGAA  A   || ||||   ||||||||||   ||| |||    ||||||   |||||||| ||||  G   GG UUCU   UUUAAUUUAG   UUC GUA    UUUGAU   UUCCUGUA UCUU  G UC  G    -AU          AUU   U   --AU      ---        U    AA |
Stem-loop sequence | CUGAGGACUUGGAUUAGAUUGGUGAGCAUGUUUAAGCUGUGAGAGGAUGUUAGAAGAAGGAAUUCUUAUGUCCUUUAGUUUUAAUGUCUUUUAGAUUUAAUUUUAUCUUGGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018967941.1 |
|
2.0 | PREDICTED: Juglans regia probable LRR receptor-like serine/threonine-protein kinase At2g23950 (LOC108993154), mRNA | NA | coding protein | psRNATarget |