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BaseInfo

ncRNA ID	novel_jre_miR930
Species	Juglans regia
Class	miRNA
Genome position	NW_017388854.1:709343-709507 [+]
Reference genome	wgs.5d
Source	SRR1170970;SRR1168883
Length	24
Mature sequence(if miRNA)	142 - AUUCCACGACUGUAUGUAACAUUG - 165
Stem-loop(if miRNA)	--   A   U          -  C      UC            C         -    -AAUAAAUA   GACCCACCUGAAA   AUG UAC UGCAGUCGUG AG GUGUAG  GCCGUGCAGUCG UUUGAAAAA AGUG         AGG             A   ||| ||| |||||||||| || ||||||  |||||||||||| ||||||||| ||||         |||   UAC AUG AUGUCAGCAC UU CGCAUU  CGGCACGUCAGC AAACUUUUU UCAC         UAA             G GU   A   U          C  A      UA            A         C    CCCAGAUAA   UUUUUUAAUUAAA
Stem-loop sequence	AUGAUACUUGCAGUCGUGAGCGUGUAGUCGCCGUGCAGUCGCUUUGAAAAAAGUGAAUAAAUAAGGGACCCACCUGAAAAGAAAUUAAUUUUUUAAUAAUAGACCCCACUCUUUUUCAAAACGACUGCACGGCAUUUACGCAUUCCACGACUGUAUGUAACAUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_018967640.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =|||||||||||=||||||||||| targets:2069   UAAUGUUACAUAUAGUCGUGGAAU   2092 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018967641.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =|||||||||||=||||||||||| targets:2119   UAAUGUUACAUAUAGUCGUGGAAU   2142 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108992921 (LOC108992921), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018974968.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =|||||||||||||||||||*||| targets:1089   UAAUGUUACAUACAGUCGUGAAAU   1112 Target Full Sequence	1.5	PREDICTED: Juglans regia uncharacterized LOC108998416 (LOC108998416), mRNA	NA	coding protein	psRNATarget
XM_018983089.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =||||||||=|||=|||||||||| targets:274   UAAUGUUACGUACGGUCGUGGAAU   297 Target Full Sequence	2.5	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_018983090.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =||||||||=|||=|||||||||| targets:274   UAAUGUUACGUACGGUCGUGGAAU   297 Target Full Sequence	2.5	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_018983086.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =||||||||=|||=|||||||||| targets:274   UAAUGUUACGUACGGUCGUGGAAU   297 Target Full Sequence	2.5	PREDICTED: Juglans regia putative transporter arsB (LOC109004518), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018960739.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =||||*||||||||||||||||=| targets:1142   UAAUGCUACAUACAGUCGUGGAGU   1165 Target Full Sequence	2.5	PREDICTED: Juglans regia uncharacterized protein At1g28695-like (LOC108987746), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_018994468.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =||||*||||||||||||||||=| targets:1424   UAAUGCUACAUACAGUCGUGGAGU   1447 Target Full Sequence	2.5	PREDICTED: Juglans regia serine/threonine-protein phosphatase PP1-like (LOC109012694), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_018983529.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =||||*||||||||||||||*||| targets:2299   UAAUGCUACAUACAGUCGUGAAAU   2322 Target Full Sequence	2.5	PREDICTED: Juglans regia UDP-sugar pyrophosphorylase-like (LOC109004826), mRNA	NA	coding protein	psRNATarget
XM_018989147.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =|||**||||||=||||||||||| targets:2716   UAAUUCUACAUAUAGUCGUGGAAU   2739 Target Full Sequence	2.5	PREDICTED: Juglans regia U-box domain-containing protein 35-like (LOC109008882), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_018989146.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =|||**||||||=||||||||||| targets:2720   UAAUUCUACAUAUAGUCGUGGAAU   2743 Target Full Sequence	2.5	PREDICTED: Juglans regia U-box domain-containing protein 35-like (LOC109008882), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_018989145.1	ncRNA:24   GUUACAAUGUAUGUCAGCACCUUA   1   =|||**||||||=||||||||||| targets:2738   UAAUUCUACAUAUAGUCGUGGAAU   2761 Target Full Sequence	2.5	PREDICTED: Juglans regia U-box domain-containing protein 35-like (LOC109008882), transcript variant X1, mRNA	NA	coding protein	psRNATarget