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BaseInfo

ncRNA ID novel_jre_miR929
Species Juglans regia
Class miRNA
Genome position NW_017389777.1:556955-557132 [+]
Reference genome wgs.5d
Source SRR1170970
Length 24
Mature sequence(if miRNA) 155 - GGGUAUCCCUUGUAGACGCAAUCU - 178
Stem-loop(if miRNA) ----AUU      CU U     UU    UUCAA    AA   GUG  -U  -U     UGCGU  G      G G        U      AAGA
       GUCUGC  G GGAUG  CAGG     AGUA  GGU   UC  CU  GCCUC     GU ACUGUU U AUAGGAGG GUAUGG    U
       ||||||  | |||||  ||||     ||||  |||   ||  ||  |||||     || |||||| | |||||||| ||||||
       CAGAUG  C CCUAU  GUUU     UCAU  CCG   AG  GG  UGGAG     CG UGACGG G UAUCUUUU UAUACC    A
UCUAACG      UU -     GG    ---UG    GA   -AA  UU  UC     -UUUU  G      G G        U      AGUU
Stem-loop sequence AUUGUCUGCCUGUGGAUGUUCAGGUUCAAAGUAAAGGUGUGUCUCUUGCCUCUGCGUGUGACUGUUGUGAUAGGAGGUGUAUGGAAGAUAUUGACCAUAUUUUUUCUAUGGGGGCAGUGGCUUUUGAGGUCUGGUUGAAAGCCAGUACUGUUUUGGGUAUCCCUUGUAGACGCAAUCU