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BaseInfo

ncRNA ID novel_jre_miR921
Species Juglans regia
Class miRNA
Genome position NW_017389220.1:1403731-1403823 [+]
Reference genome wgs.5d
Source SRR1170969
Length 24
Mature sequence(if miRNA) 1 - AAUUCUACUCAUCAUCCUCACACC - 24
Stem-loop(if miRNA) --AA               UC      C   CCACAUAAUUUUUUA
    UUCUACUCAUCAUCC  ACACCA ACA               U
    |||||||||||||||  |||||| |||               U
    AAGAUGAGUAGUAGG  UGUGGU UGU               U
CAAG               UA      U   AAACCAUCCUCUUUU
Stem-loop sequence AAUUCUACUCAUCAUCCUCACACCACACACCACAUAAUUUUUUAUUUUUUUCUCCUACCAAAUGUUUGGUGUAUGGAUGAUGAGUAGAAGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018984884.1
ncRNA:24   CCAC-ACUCCUACUACUCAUCUUAA   1
  |*||-||||||||||||||||=|||
targets:1061   GAUGAUGAGGAUGAUGAGUAGGAUU   1085

1.5 PREDICTED: Juglans regia 60S ribosomal protein L5-like (LOC109005829), mRNA NA coding protein psRNATarget
XM_018982899.1
ncRNA:24   CCACACUCCUACUACUCAUCUUAA   1
  |||*||=|||||||||||||*|||
targets:2041   GGUAUGGGGAUGAUGAGUAGUAUU   2064

2.5 PREDICTED: Juglans regia probable polyol transporter 4 (LOC109004366), mRNA NA coding protein psRNATarget