ncRNA ID | novel_jre_miR921 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389220.1:1403731-1403823 [+] |
Reference genome | wgs.5d |
Source | SRR1170969 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUCUACUCAUCAUCCUCACACC - 24 |
Stem-loop(if miRNA) |
--AA               UC      C   CCACAUAAUUUUUUA     UUCUACUCAUCAUCC  ACACCA ACA               U     |||||||||||||||  |||||| |||               U     AAGAUGAGUAGUAGG  UGUGGU UGU               U CAAG               UA      U   AAACCAUCCUCUUUU |
Stem-loop sequence | AAUUCUACUCAUCAUCCUCACACCACACACCACAUAAUUUUUUAUUUUUUUCUCCUACCAAAUGUUUGGUGUAUGGAUGAUGAGUAGAAGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018984884.1 |
|
1.5 | PREDICTED: Juglans regia 60S ribosomal protein L5-like (LOC109005829), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018982899.1 |
|
2.5 | PREDICTED: Juglans regia probable polyol transporter 4 (LOC109004366), mRNA | NA | coding protein | psRNATarget |