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BaseInfo

ncRNA ID novel_jre_miR920
Species Juglans regia
Class miRNA
Genome position NW_017443617.1:740630-740737 [+]
Reference genome wgs.5d
Source SRR1170969
Length 24
Mature sequence(if miRNA) 1 - UGCUGUGCAGUCGCUUUGAAAAAG - 24
Stem-loop(if miRNA) --U  UG  C              A     ----------  GU   -CUAU       U
   GC  UG AGUCGCUUUGAAAA GAGUG          GG  CUA     UAAAAAA U
   ||  || |||||||||||||| |||||          ||  |||     |||||||
   CG  GC UUAGUGAAGCUUUU UUCAC          UC  GGU     AUUUUUU A
UCG  GU  A              -     UUAUUUAUGU  UG   AUAUU       A
Stem-loop sequence UGCUGUGCAGUCGCUUUGAAAAAGAGUGGGGUCUACUAUUAAAAAAUUAAUUUUUUAUUAUAUGGGUCUUGUAUUUAUUCACUUUUUUCGAAGUGAUUACGUGGCGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018969224.1
ncRNA:24   GAAAAAGUUUCGCUGACGUGUCGU   1
  |*||*||||||||||||||||*|*
targets:522   CCUUCUCAAAGCGACUGCACAUCC   545

2.5 PREDICTED: Juglans regia endoglucanase 17 (LOC108994130), mRNA NA coding protein psRNATarget