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BaseInfo

ncRNA ID novel_jre_miR916
Species Juglans regia
Class miRNA
Genome position NW_017388926.1:157742-157846 [+]
Reference genome wgs.5d
Source SRR1168880
Length 21
Mature sequence(if miRNA) 1 - UUGGGCAUAAUUGGAAAAAUU - 21
Stem-loop(if miRNA) --        A        A  U         AA     UGCAA     AAA   U
  UUGGGCAU AUUGGAAA AU CAAUCCUCU  GCGAA     AUUUG   UUG U
  |||||||| |||||||| || |||||||||  |||||     |||||   ||| C
  GACCCGUA UAACCUUU UA GUUAGGAGA  UGCUU     UGAAC   AAC A
GG        C        G  C         --     -----     -CA   G
Stem-loop sequence UUGGGCAUAAUUGGAAAAAUUCAAUCCUCUAAGCGAAUGCAAAUUUGAAAUUGUUCAGCAAACCAAGUUUCGUAGAGGAUUGCAUGUUUCCAAUCAUGCCCAGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018961474.1
ncRNA:21   UUAA-AAAGGUUAAUACGGGUU   1
  **||-||||||||||||||||*
targets:104   CCUUAUUUCCAAUUAUGCCCAC   125

3.0 PREDICTED: Juglans regia protein OBERON 4-like (LOC108988256), mRNA NA coding protein psRNATarget