ncRNA ID | novel_jre_miR916 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388926.1:157742-157846 [+] |
Reference genome | wgs.5d |
Source | SRR1168880 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGGGCAUAAUUGGAAAAAUU - 21 |
Stem-loop(if miRNA) |
--        A        A  U         AA     UGCAA     AAA   U   UUGGGCAU AUUGGAAA AU CAAUCCUCU  GCGAA     AUUUG   UUG U   |||||||| |||||||| || |||||||||  |||||     |||||   ||| C   GACCCGUA UAACCUUU UA GUUAGGAGA  UGCUU     UGAAC   AAC A GG        C        G  C         --     -----     -CA   G |
Stem-loop sequence | UUGGGCAUAAUUGGAAAAAUUCAAUCCUCUAAGCGAAUGCAAAUUUGAAAUUGUUCAGCAAACCAAGUUUCGUAGAGGAUUGCAUGUUUCCAAUCAUGCCCAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018961474.1 |
|
3.0 | PREDICTED: Juglans regia protein OBERON 4-like (LOC108988256), mRNA | NA | coding protein | psRNATarget |