ncRNA ID | novel_jre_miR914 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017440507.1:26495-26602 [-] |
Reference genome | wgs.5d |
Source | SRR1170969 |
Length | 24 |
Mature sequence(if miRNA) | 85 - CGCCGUGUAAUCGUUUUGAAAAAG - 108 |
Stem-loop(if miRNA) |
--  C                      G   -----------       U  U      U   CG CGUGUAAUCGUUUUGAAAAAGA UGA           GGUUUAC AU AAAAAA U   || |||||||||||||||||||||| |||           ||||||| || |||||| A   GC GCGCAUUAGUGAAACUUUUUUU ACU           CUAAGUG UA UUUUUU A UG  A                      -   UAUUUUGUAUC       -  C      U |
Stem-loop sequence | CGCCGUGUAAUCGUUUUGAAAAAGAGUGAGGUUUACUAUUAAAAAAUUAAUUUUUUUCAUGUGAAUCCUAUGUUUUAUUCAUUUUUUUCAAAGUGAUUACGCGACGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018970092.1 |
|
2.5 | PREDICTED: Juglans regia translation initiation factor eIF-2B subunit epsilon (LOC108994766), transcript variant X6, mRNA | NA | coding protein | psRNATarget |