ncRNA ID | novel_jre_miR913 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017439342.1:55212-55376 [-] |
Reference genome | wgs.5d |
Source | SRR1170969 |
Length | 20 |
Mature sequence(if miRNA) | 146 - AGCUCUCUUCAGUCCAGUCC - 165 |
Stem-loop(if miRNA) |
--                 UC  A       -    -    UGACACU     G   AC      GU        U    AAAAUG   AGCUCUCUUCAGUCCAG  CG GGCAGUU CGAG GGGC       CAGCU CUG  UCGUUG  UCAAGAAC CAUC      U   |||||||||||||||||  || ||||||| |||| ||||       ||||| |||  ||||||  |||||||| ||||      A   UCGAGGGAAGUCAGGUU  GC CUGUCGA GUUC CUUG       GUCGA GAC  AGCAAC  AGUUUUUG GUGG      C CC                 CU  A       C    A    ------U     G   GU      UU        U    AAGGAA |
Stem-loop sequence | AGCUCUCUUCAGUCCAGUCCGAGGCAGUUCGAGGGGCUGACACUCAGCUGCUGACUCGUUGGUUCAAGAACUCAUCAAAAUGUACAAGGAAGGUGUGUUUUUGAUUCAACGAUGCAGGAGCUGUGUUCACUUGCAGCUGUCACGUCUUGGACUGAAGGGAGCUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018990436.1 |
|
3.0 | PREDICTED: Juglans regia IQ domain-containing protein IQM2-like (LOC109009813), mRNA | NA | coding protein | psRNATarget |