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BaseInfo

ncRNA ID novel_jre_miR913
Species Juglans regia
Class miRNA
Genome position NW_017439342.1:55212-55376 [-]
Reference genome wgs.5d
Source SRR1170969
Length 20
Mature sequence(if miRNA) 146 - AGCUCUCUUCAGUCCAGUCC - 165
Stem-loop(if miRNA) --                 UC  A       -    -    UGACACU     G   AC      GU        U    AAAAUG
  AGCUCUCUUCAGUCCAG  CG GGCAGUU CGAG GGGC       CAGCU CUG  UCGUUG  UCAAGAAC CAUC      U
  |||||||||||||||||  || ||||||| |||| ||||       ||||| |||  ||||||  |||||||| ||||      A
  UCGAGGGAAGUCAGGUU  GC CUGUCGA GUUC CUUG       GUCGA GAC  AGCAAC  AGUUUUUG GUGG      C
CC                 CU  A       C    A    ------U     G   GU      UU        U    AAGGAA
Stem-loop sequence AGCUCUCUUCAGUCCAGUCCGAGGCAGUUCGAGGGGCUGACACUCAGCUGCUGACUCGUUGGUUCAAGAACUCAUCAAAAUGUACAAGGAAGGUGUGUUUUUGAUUCAACGAUGCAGGAGCUGUGUUCACUUGCAGCUGUCACGUCUUGGACUGAAGGGAGCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018990436.1
ncRNA:20   CCUGACCUGACUUCUCUCGA   1
  ***|||*|||||||||||||
targets:2429   ACUCUGAACUGAAGAGAGCU   2448

3.0 PREDICTED: Juglans regia IQ domain-containing protein IQM2-like (LOC109009813), mRNA NA coding protein psRNATarget