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BaseInfo

ncRNA ID novel_jre_miR910
Species Juglans regia
Class miRNA
Genome position NW_017443621.1:895053-895173 [+]
Reference genome wgs.5d
Source SRR1168880
Length 24
Mature sequence(if miRNA) 1 - CACUCUGCACAUCACUUAAAAAAU - 24
Stem-loop(if miRNA) --     -       C         A     UAU            UC             
  CACUC UGCACAU ACUUAAAAA UAUAU   UUUAUUCUUUUA  CUCAUAUUUUAUAU
  ||||| ||||||| ||||||||| |||||   ||||||||||||  |||||||||||||U
  GUGAG ACGUGUG UGAAUUUUU AUAUA   AAAUAAGAAAAU  GAGUAUAAAAUAUU
GU     G       A         -     UUU            GA             
Stem-loop sequence CACUCUGCACAUCACUUAAAAAAUAUAUUAUUUUAUUCUUUUAUCCUCAUAUUUUAUAUUUUAUAAAAUAUGAGAGUAAAAGAAUAAAUUUAUAUAUUUUUAAGUAGUGUGCAGGAGUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018987048.1
ncRNA:24   UAAAAAAUUCACUACACGUCUCAC   1
  ||||||||||||=||||||||||*
targets:190   AUUUUUUAAGUGGUGUGCAGAGUU   213

2.5 PREDICTED: Juglans regia diphosphomevalonate decarboxylase MVD2-like (LOC109007386), mRNA NA coding protein psRNATarget
XM_018969625.1
ncRNA:24   UAAAAAAUUCACUACACGUCUCAC   1
  |||||*||*|*|||||||||||||
targets:2617   AUUUUGUAUGAGAUGUGCAGAGUG   2640

3.0 PREDICTED: Juglans regia uncharacterized LOC108994417 (LOC108994417), mRNA NA coding protein psRNATarget