ncRNA ID | novel_jre_miR910 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443621.1:895053-895173 [+] |
Reference genome | wgs.5d |
Source | SRR1168880 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACUCUGCACAUCACUUAAAAAAU - 24 |
Stem-loop(if miRNA) |
--     -       C         A     UAU            UC                CACUC UGCACAU ACUUAAAAA UAUAU   UUUAUUCUUUUA  CUCAUAUUUUAUAU   ||||| ||||||| ||||||||| |||||   ||||||||||||  |||||||||||||U   GUGAG ACGUGUG UGAAUUUUU AUAUA   AAAUAAGAAAAU  GAGUAUAAAAUAUU GU     G       A         -     UUU            GA              |
Stem-loop sequence | CACUCUGCACAUCACUUAAAAAAUAUAUUAUUUUAUUCUUUUAUCCUCAUAUUUUAUAUUUUAUAAAAUAUGAGAGUAAAAGAAUAAAUUUAUAUAUUUUUAAGUAGUGUGCAGGAGUGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018987048.1 |
|
2.5 | PREDICTED: Juglans regia diphosphomevalonate decarboxylase MVD2-like (LOC109007386), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018969625.1 |
|
3.0 | PREDICTED: Juglans regia uncharacterized LOC108994417 (LOC108994417), mRNA | NA | coding protein | psRNATarget |