ncRNA ID | novel_jre_miR909 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388864.1:61754-61884 [+] |
Reference genome | wgs.5d |
Source | SRR1170968 |
Length | 24 |
Mature sequence(if miRNA) | 108 - AAUGACUAUUGUAUUGCCUUGGCC - 131 |
Stem-loop(if miRNA) |
--                A          A              --UCUU  -      A  G CAU   CCAAGGCAAUACAAUA UCAUUCUUAA CAAUGUGAGACUUA      GG CCUACA UA U   U   |||||||||||||||| |||||||||| ||||||||||||||      || |||||| || |   GGUUCCGUUAUGUUAU AGUAAGAAUU GUUACACUUUGAAU      UC GGGUGU AU A   C CC                C          C              UACAAU  A      A  G AUU |
Stem-loop sequence | CCAAGGCAAUACAAUAAUCAUUCUUAAACAAUGUGAGACUUAUCUUGGCCUACAAUAGUCAUUCUUAAGUAAUGUGGGACUUAACAUUAAGUUUCACAUUGCUUAAGAAUGACUAUUGUAUUGCCUUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018972167.1 |
|
2.5 | PREDICTED: Juglans regia trihelix transcription factor GT-2-like (LOC108996329), mRNA | NA | coding protein | psRNATarget |