ncRNA ID | novel_jre_miR907 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017389369.1:56789-56893 [-] |
Reference genome | wgs.5d |
Source | SRR1170968 |
Length | 23 |
Mature sequence(if miRNA) | 83 - AUUCUAUAAAUUGAUGUGGUUUG - 105 |
Stem-loop(if miRNA) |
--AUUC                       U   UA      ------       U       UAUAAAUUGAUGUGGUUUGAUGU AUU  UUAGAU      UGUGAAG U       ||||||||||||||||||||||| |||  ||||||      ||||||| A       AUGUUUAACUGCACUAAAUUACA UAA  AAUCUA      AUAUUUU C AUUAAA                       C   GC      AAUAAA       U |
Stem-loop sequence | AUUCUAUAAAUUGAUGUGGUUUGAUGUUAUUUAUUAGAUUGUGAAGUUACUUUUUAUAAAAUAAAUCUAACGAAUCACAUUAAAUCACGUCAAUUUGUAAAAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018987179.1 |
|
2.5 | PREDICTED: Juglans regia RNA polymerase sigma factor sigA-like (LOC109007498), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_018987180.1 |
|
2.5 | PREDICTED: Juglans regia RNA polymerase sigma factor sigA-like (LOC109007498), transcript variant X2, mRNA | NA | coding protein | psRNATarget |