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BaseInfo

ncRNA ID novel_jre_miR906
Species Juglans regia
Class miRNA
Genome position NW_017443624.1:69514-69639 [+]
Reference genome wgs.5d
Source SRR1170968
Length 22
Mature sequence(if miRNA) 105 - GAUGAGAGGAUAAUGGAAGCUG - 126
Stem-loop(if miRNA) --A       C      C        A        G           A  UUUACAAG  AAA
   CUUCUAU AUCUUC UAUCAUCU AUGAUGUG CAUUAAAUGAU GG        UA   U
   ||||||| |||||| |||||||| |||||||| ||||||||||| ||        ||
   GAAGGUA UAGGAG GUAGUAGA UACUACAC GUAAUUUACUA CC        AU   A
GUC       A      A        A        A           A  UCUAAUAA  AAU
Stem-loop sequence ACUUCUAUCAUCUUCCUAUCAUCUAAUGAUGUGGCAUUAAAUGAUAGGUUUACAAGUAAAAUAUAAUAAAUAAUCUCCAAUCAUUUAAUGACACAUCAUAAGAUGAUGAGAGGAUAAUGGAAGCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018989638.1
ncRNA:22   GUCGAAGGUAAUAGGAGAGUAG   1
  *|*|||||*||||||||||||*
targets:4   GAUCUUCCCUUAUCCUCUCAUG   25

2.0 PREDICTED: Juglans regia transcription factor TCP15-like (LOC109009238), mRNA NA coding protein psRNATarget