ncRNA ID | novel_jre_miR906 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017443624.1:69514-69639 [+] |
Reference genome | wgs.5d |
Source | SRR1170968 |
Length | 22 |
Mature sequence(if miRNA) | 105 - GAUGAGAGGAUAAUGGAAGCUG - 126 |
Stem-loop(if miRNA) |
--A       C      C        A        G           A  UUUACAAG  AAA    CUUCUAU AUCUUC UAUCAUCU AUGAUGUG CAUUAAAUGAU GG        UA   U    ||||||| |||||| |||||||| |||||||| ||||||||||| ||        ||    GAAGGUA UAGGAG GUAGUAGA UACUACAC GUAAUUUACUA CC        AU   A GUC       A      A        A        A           A  UCUAAUAA  AAU |
Stem-loop sequence | ACUUCUAUCAUCUUCCUAUCAUCUAAUGAUGUGGCAUUAAAUGAUAGGUUUACAAGUAAAAUAUAAUAAAUAAUCUCCAAUCAUUUAAUGACACAUCAUAAGAUGAUGAGAGGAUAAUGGAAGCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018989638.1 |
|
2.0 | PREDICTED: Juglans regia transcription factor TCP15-like (LOC109009238), mRNA | NA | coding protein | psRNATarget |