Search result

BaseInfo

ncRNA ID	novel_jre_miR884
Species	Juglans regia
Class	miRNA
Genome position	NW_017443285.1:25290-25401 [+]
Reference genome	wgs.5d
Source	SRR1170966;SRR1168884
Length	24
Mature sequence(if miRNA)	89 - AUGAUUAUUGUAUUGUCUUGGCCU - 112
Stem-loop(if miRNA)	--                             C               AC     CUC   GCCAAGACAAUACAAUAAUCAUCCUUAAG AAUGUGAGACUUACU  UAAGU   A   ||||||||||||||||||||||||||||| |||||||||||||||  |||||   CGGUUCUGUUAUGUUAUUAGUAGGAAUUC UUACACUCUGGAUGA  AUUCG   C UC                             A               --     UUA
Stem-loop sequence	GCCAAGACAAUACAAUAAUCAUCCUUAAGCAAUGUGAGACUUACUACUAAGUCUCACAUUGCUUAAGUAGGUCUCACAUUACUUAAGGAUGAUUAUUGUAUUGUCUUGGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019003459.1	ncRNA:24   UCCGGUUCUGUUAUGUUAUUAGUA   1   ****|||||||||||||||||*|* targets:1171   UUAACAAGACAAUACAAUAAUAAG   1194 Target Full Sequence	2.5	PREDICTED: Juglans regia peroxidase A2-like (LOC109020930), mRNA	NA	coding protein	psRNATarget