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BaseInfo

ncRNA ID novel_jre_miR882
Species Juglans regia
Class miRNA
Genome position NW_017443268.1:330524-330572 [+]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 1 - AUUGAUUGUGGAUUCAAGGGAUUC - 24
Stem-loop(if miRNA) --AU    U         A    UU
    UGAU GUGGAUUCA GGGA  C
    |||| ||||||||| ||||
    ACUA UACUUGGGU CCUU  C
UUUC    -         A    UA
Stem-loop sequence AUUGAUUGUGGAUUCAAGGGAUUCCAUUUCCAUGGGUUCAUAUCACUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018966391.1
ncRNA:24   CUUAGGGAACUUAGGUGUUAGUUA   1
  ||||||*|||||*|||||||||||
targets:486   GAAUCCGUUGAACCCACAAUCAAU   509

2.5 PREDICTED: Juglans regia collagen alpha-2(I) chain-like (LOC108991962), mRNA NA coding protein psRNATarget