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BaseInfo

ncRNA ID novel_jre_miR881
Species Juglans regia
Class miRNA
Genome position NW_017443224.1:834560-834612 [+]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 30 - AUUUCUCAACCGUCACUAAAAAGU - 53
Stem-loop(if miRNA) --A              U     C  
   UUUUAGUGACGGUU AGAGA UGU
   |||||||||||||| ||||| ||C
   AAAAUCACUGCCAA UCUUU ACA
UGA              C     A  
Stem-loop sequence AUUUUAGUGACGGUUUAGAGACUGUCACAAUUUCUCAACCGUCACUAAAAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019001129.1
ncRNA:24   UGA--A-AAAUCACUGCCAACUCUUUA   1
  |=|--|-||||||||||||||=|||||
targets:1170   AUUGGUCUUUAGUGACGGUUGGGAAAU   1196

1.5 PREDICTED: Juglans regia stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like (LOC109018931), mRNA NA coding protein psRNATarget