ncRNA ID | novel_jre_miR877 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017388882.1:379543-379714 [-] |
Reference genome | wgs.5d |
Source | SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUCAUUCUCCCUCGUUGUGUACA - 24 |
Stem-loop(if miRNA) |
--              AU     C             G                               U  C           GA   UACACAACGAGGGA  AUGAU UUGAAGAAAUGUU AAAUUUUAAUUUAAUUGCUUGACUGUCAUAG CU UCCGGCCUUGA  G   ||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||   AUGUGUUGCUCCCU  UACUA AACUUCUUUACAA UUUAAAAUUAGAUUAAUGAAUUGGCAGUGUU GA AGGCUGGAACU  U AC              CU     A             A                               U  C           GU |
Stem-loop sequence | UACACAACGAGGGAAUAUGAUCUUGAAGAAAUGUUGAAAUUUUAAUUUAAUUGCUUGACUGUCAUAGUCUCUCCGGCCUUGAGAGUUGUCAAGGUCGGACAGUUUGUGACGGUUAAGUAAUUAGAUUAAAAUUUAAACAUUUCUUCAAAAUCAUUCUCCCUCGUUGUGUACA |