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BaseInfo

ncRNA ID novel_jre_miR867
Species Juglans regia
Class miRNA
Genome position NW_017440164.1:33737-33842 [+]
Reference genome wgs.5d
Source SRR1170966
Length 24
Mature sequence(if miRNA) 83 - AUAUUUGGAGAACUAUGAGGAGAU - 106
Stem-loop(if miRNA) C   -      U               -A    C   GAUA UG   C    UA
 AUC CCUUAU GUUCUCUAGAUAUGC  GUUU GGU    G  CAU GAUG  U
 ||| |||||| |||||||||||||||  |||| |||    |  ||| ||||  U
 UAG GGAGUA CAAGAGGUUUAUAUG  UAAA CCA    C  GUG CUGU  A
-   A      U               AG    -   -ACA GU   A    UC
Stem-loop sequence CAUCCCUUAUUGUUCUCUAGAUAUGCAGUUUCGGUGAUAGUGCAUCGAUGUAUUACUUGUCAGUGUGCACAACCAAAUGAGUAUAUUUGGAGAACUAUGAGGAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018952435.1
ncRNA:24   UAGAGGAGUAUCAAGAGGUUUAUA   1
  *|||*||||*||||||*|||||||
targets:304   CUCUGCUCAAAGUUCUGCAAAUAU   327

2.5 PREDICTED: Juglans regia feruloyl CoA ortho-hydroxylase 2 (LOC108981320), mRNA NA coding protein psRNATarget