ncRNA ID | novel_jre_miR858 |
Species | Juglans regia |
Class | miRNA |
Genome position | NW_017430834.1:412-583 [+] |
Reference genome | wgs.5d |
Source | SRR1170966 |
Length | 24 |
Mature sequence(if miRNA) | 149 - AAUCAUUCUCCCUCGUUGUGUACA - 172 |
Stem-loop(if miRNA) |
--              AU     C             G                               U  C           GA   UACACAACGAGGGA  AUGAU UUGAAGAAAUGUU AAAUUUUAAUUUAAUUGCUUGACUGUCAUAG CU UCCGGCCUUGA  G   ||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||   AUGUGUUGCUCCCU  UACUA AACUUCUUUACAA UUUAAAAUUAGAUUAAUGAAUUGGCAGUGUU GA AGGCUGGAACU  U AC              CU     A             A                               U  C           GU |
Stem-loop sequence | UACACAACGAGGGAAUAUGAUCUUGAAGAAAUGUUGAAAUUUUAAUUUAAUUGCUUGACUGUCAUAGUCUCUCCGGCCUUGAGAGUUGUCAAGGUCGGACAGUUUGUGACGGUUAAGUAAUUAGAUUAAAAUUUAAACAUUUCUUCAAAAUCAUUCUCCCUCGUUGUGUACA |